Information for 1-TCCATAAK (Motif 1)

C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
Reverse Opposite:
G T C A A G C T C G A T G T C A A C G T A C T G A C T G G T C A
p-value:1e-6
log p-value:-1.591e+01
Information Content per bp:1.699
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif57.89%
Number of Background Sequences with motif2085.7
Percentage of Background Sequences with motif9.01%
Average Position of motif in Targets211.3 +/- 141.5bp
Average Position of motif in Background218.8 +/- 146.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TCCATAAK---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCCATAAK
VTTRCATAAY
 A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TCCATAAK
ANGTTACATAA-
 A C G T A C G T A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCATAAK
ATTGCATCAK
 A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCATAAK
ATTGCATCAT
 A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCATAAK---
ATGCATAATTCA
 A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCATAAK--
ACCATATGGT
 C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T A C G T A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCCATAAK
AATTTGCATANT
 A C G T A C G T A C G T A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

POU4F1/MA0790.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCATAAK-----
ATGAATAATTAATG
 A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCATAAK-
ATGAATATTC
 A C G T C A G T T G A C G T A C G T C A A C G T G C T A C T G A A C G T A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C