Information for 2-CACTCGTGCT (Motif 3)

A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
Reverse Opposite:
C G T A A T C G T A G C G T C A A G T C C T A G C G T A C T A G A G C T A C T G
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.730
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif36.84%
Number of Background Sequences with motif649.0
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets250.6 +/- 127.8bp
Average Position of motif in Background268.5 +/- 181.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACTCGTGCT-
-GCTCGGSCTC
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACTCGTGCT
NACACGTGCN
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACTCGTGCT
-ACACGTGC-
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T

PB0043.1_Max_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CACTCGTGCT--
CCNNANCACGTGGTCN
 A C G T A C G T A C G T A C G T A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACTCGTGCT------
-TNTCCTGCTGTGNNG
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTCGTGCT
-RTACGTGC-
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACTCGTGCT
--CACGTGNT
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTCGTGCT
-GGACGTGC-
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACTCGTGCT
ACCACGTGCC
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACTCGTGCT
ACCACGTGCT
 A G T C T C G A G A T C C G A T A G T C T C A G A C G T A T C G A T G C A C G T
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T