Information for 3-GTAGCAGCTA (Motif 4)

A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
G C A T C G T A A C T G A G T C C G A T A C T G A G T C C G A T C G T A A G T C
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.892
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets228.0 +/- 160.8bp
Average Position of motif in Background261.3 +/- 142.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTAGCAGCTA-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTAGCAGCTA--
NNAGCAGCTGCT
 A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTAGCAGCTA--
--AGCAGCTGCT
 A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTAGCAGCTA
--ANCAGCTG
 A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GTAGCAGCTA
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCAGCTA
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTAGCAGCTA-
-CAGCAGCTGN
 A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTAGCAGCTA--
NGNGACAGCTGCN
 A C G T A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTAGCAGCTA--
--CGCAGCTGCG
 A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTAGCAGCTA
AGGGTAACAGC--
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T