Information for 2-ATTACACG (Motif 5)

C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
Reverse Opposite:
A G T C A C T G A G C T A C T G A C G T C T G A C G T A A G C T
p-value:1e-5
log p-value:-1.277e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif31.58%
Number of Background Sequences with motif521.4
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets273.7 +/- 114.0bp
Average Position of motif in Background245.1 +/- 164.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BSX/MA0876.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTACACG
CCAATTAA---
 A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTACACG-----------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTACACG
YCATTAMC--
 A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTACACG
GCAATTAG---
 A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTACACG
ACTAATTAAA--
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATTACACG--
----CACGCA
 C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATTACACG-
-TCACACCT
 C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G A C G T
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

HOXA2/MA0900.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTACACG
CCTAATTACC--
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTACACG------
NNTATTACATGTANNNT
 A C G T A C G T A C G T C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATTACACG---
---GCACGTNC
 C T G A A C G T A G C T C G T A A G T C C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C