Information for 4-GGCGGACACT (Motif 7)

A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C A G T C
p-value:1e-4
log p-value:-9.663e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif31.58%
Number of Background Sequences with motif905.6
Percentage of Background Sequences with motif3.91%
Average Position of motif in Targets381.7 +/- 99.0bp
Average Position of motif in Background279.9 +/- 176.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGACACT-
NCGCGGACGTTG
 A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGCGGACACT--
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGACACT-
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCGGACACT
TAATGGCGGNC---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCGGACACT
VGCTGWCAVB
 A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCGGACACT
CWGGCGGGAA--
 A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCGGACACT---
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGACACT-
TGTCTGDCACCT
 A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCGGACACT
BTKGGCGGGAAA-
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCGGACACT---
---AASCACTCAA
 A C T G A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A